We offer basic support in image analysis and statistical data analysis to our external visitors for the screens that they carry out during their visit. Training for other topics in image analysis and microscope automation can be arranged on demand, please contact image-analysis-support. Additional FIJI training is provided by the CBA. Basic FIJI/Image J training, offered as part of our Basics in Microscopy courses.The ALMF and Center for Bioimage Analysis (CBA) team up to run a number of image analysis training courses (ALMF courses, CBA upcoming events), both regular and on demand. Imaris ( Bitplane / Andor): Commercial 4D analysis and visualization tool.For more information and access, please contact ALMF. SVI Huygens Professional: Workstation / VM based deconvolution for 2D and 3D datasets, tile stitching and light sheet image fusion.
#Cellprofiler output during processing software
Fiji (ImageJ): Open source image analysis software with large user and developer community.CellProfiler: Open source software for batch analysis of large microscopy data sets.Software packages available on our workstations include: We offer several virtual workstations in the EMBL 3D cloud (‘gold’ and ‘silver’ versions ) and dedicated image analysis workstations If you have questions, problems or projects in image analysis, please contact Image Analysis Support.
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